Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801644.1_cds_XP_016476339.1_6788
CDS Infomation

[gene=LOC107797919] [db_xref=GeneID:107797919] [protein=protein LNK1-like isoform X3] [protein_id=XP_016476339.1] [location=complement(join(4932..5052,7095..7243,7888..8475,8992..9325,9445..9782))] [gbkey=CDS]
Sequence

ATGATGTTAGAAGAGGACTTATGGGCGGACGCACGTGATTTTGTGTTGCCTAATACCTGT
GGCAAAAGCTCATTGAATGTTGGGACATTGCATCATTGCTTCAAACGTAAAAACGTAGAC
TCCATTGACAGTGACTTCTGCCAAAATGGCCCCATTTTGGACAACAAGAAAGCTGCCATT
GGGGAAAACTCTTGTAGCTTTCCACTTGGTCCCATTTCTCTGGTAGATGATGATCTGAGT
TGTTTTGACAACAACCGGGTGGATAAAAACACTAATGATCTCTTGTATTATAACTGGTCT
GAGATGGGGAACTTTGAGGATATTGACATGATGTTCAGTTGTGATTCGACATTTGGACTT
GGAGCCAGCAATGAGGATGACCTTGGTTGGTTTGCATCATCAGATACTATTGAAGGATCT
GGAGATCGATTGAGGTCAGATATTCAGTGTCAAAACTCAACATCCAGTGCACTGAAAAAA
AACGGCAGTCTTGAAGTTTCAAGAACGGAGGAAATGGGCAGTTCAATTAGTGATTCTGGC
ATTAAAAGTCAACCAGTTAGCTATAATGGAAATTTGTGGCCCTCACAGAAAGATGAATTG
GCCAATCTGAGCCATCTGTCTTTTGTGAATGGATCAAGTAATTCAGATTGCAAACTAGTA
CCTCTAAAGAAAAATAATATAAGTAAGAAGCACGCAAATCACCAGAACCAATCGGAAGGA
AAGAGAAAATGTGTTTATATAGAAAATGATGTTGCCTTGCGTAACATTGATGGCCTTTCA
GAAGAGAGAAGACATTCTACTGAGGCCACTGGACCTAAAGGCAATTTGATATCATCGGGT
ATTCCTCAGCAAAATGAAGCTCATGAACATGAGACTGGTTACTTACATAGTGGCGTTTCT
TACATGTCTGATTACAGTCGTTCAGATCAAATTGTCCATCACCCAACTTCATCGATTACC
AAATCTGGAAATGATGGTTCCATGTCCCTTTCACCAAATCATCTGCAGTGTAGGCAGAGC
TCTCCTGATCCTTCTTTTCAGATGGGTACTATCACAACAAGTGAAAAGGTGGAGGAGAAG
CTACTTCATCATTCTGGAATTAAGTTTGAAAATAGCAGTGATCCTGAAGGCATTAGCACG
AGAATTCCACCAGAATTAGGTTCCTCAATTATAGCAGAGAGCACTTCCATTAGTTCTGGG
TTGGATGAAGTAGCAGAAGAAACTGCTGGATTTCATCAGCTTCAACATGTCACAGAACGG
TTGGATATAAGGACAAAGCTCTGCATAAGGGATAGCTTGTACCGGTTGGCTCGGAGTGCT
GAACAAAGGCATAGAGATGCTAATGTCATTAATGACTCTGGAGATGATAGAGATACAAGC
CAAGCATTGACTTGCAAAAGGACAAACAAGTGGCAAGGGTATATGGACATGGAAAGAGAC
ACCAATTCTTTAGATCGATCTATTGCACATTTGCTCTTCCTCAGGTCTTCAGGCTCATCT
GTAACACCTGCCCCTGATTCCTTGGCTTGA

Peptide Sequence

PEP ID

XP_016476339.1
PEP Infomation

PREDICTED: protein LNK1-like isoform X3 [Nicotiana tabacum]
Sequence

MMLEEDLWADARDFVLPNTCGKSSLNVGTLHHCFKRKNVDSIDSDFCQNGPILDNKKAAI
GENSCSFPLGPISLVDDDLSCFDNNRVDKNTNDLLYYNWSEMGNFEDIDMMFSCDSTFGL
GASNEDDLGWFASSDTIEGSGDRLRSDIQCQNSTSSALKKNGSLEVSRTEEMGSSISDSG
IKSQPVSYNGNLWPSQKDELANLSHLSFVNGSSNSDCKLVPLKKNNISKKHANHQNQSEG
KRKCVYIENDVALRNIDGLSEERRHSTEATGPKGNLISSGIPQQNEAHEHETGYLHSGVS
YMSDYSRSDQIVHHPTSSITKSGNDGSMSLSPNHLQCRQSSPDPSFQMGTITTSEKVEEK
LLHHSGIKFENSSDPEGISTRIPPELGSSIIAESTSISSGLDEVAEETAGFHQLQHVTER
LDIRTKLCIRDSLYRLARSAEQRHRDANVINDSGDDRDTSQALTCKRTNKWQGYMDMERD
TNSLDRSIAHLLFLRSSGSSVTPAPDSLA

Transcript Sequence

Gene sequence data has not been registered.